Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948799.1_cds_XP_016489959.1_80427
CDS Infomation

[gene=LOC107809782] [db_xref=GeneID:107809782] [protein=probable galacturonosyltransferase 14 isoform X2] [protein_id=XP_016489959.1] [location=join(24733..24952,26211..26266,26405..26560,26956..27546,28213..28515,29109..29390)] [gbkey=CDS]
Sequence

ATGCAGCTGCACTTCTCACCTAGCATGAGAAGTATAACAATATCGAGCAGCAATAGCAAT
GGAGGGTTTGGTGAATTGATGAAGATCAAAGTAGCAGCTCGCCACTTCTCCTACAGAACA
CTATTTCATACAATACTTATCTTAGCTTTCTTGTTGCCATTTGTCTTCATTCTCACTGCT
GTTGTTACCCTTGAAGGTGTCAACAAGTGCTCCTCATTTGATTGTTTAGGCAGACGATTG
GGACCAAAGCTTCTTGGACGTACTGATGATTCTAAGAGGTTGGTTAAGGATTTTGTTAAG
ATCCTCAATCAAGTGAATTCTGAAGAAGTGCCAGCTGGCCTGAAGCTCCCAGAGTCTTAT
AGTCAACTTGTTTCTGAAATGAAAAATAACAAGTACAGTGCAAAAGAATTTGCTTTGATG
CTGAAGGGAATGATGGATAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCGGAGCTC
ATGAATAAACACTTTGCTGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCGCTGCGG
TTGACTGATGAGTACTCATCTAATGCTCATGCACGCAGACAGTTGCCTTCACCAGAGCTA
CTCCCTCTGCTTTCTGAGAAGTTGTTGCACCATTTTGTATTGTCAACTGATAATATCCTA
GCTGCTTCAGTTGTGGTCAATTCTGCTGTGCGGTCATCTCTAAAGCCTGAAAAAATTGTT
TTCCACGTCATCACTGACAAGAAAACATATGCAGGGATGCACTCCTGGTTTGCTCTGAAT
CCTGTCTCTCCCGCTATTGTGGAAGTTAGAGGTATTCATCAGTTTGACTGGTTAACCAGA
GAAAATATTCCAGTGCTTGAAGCAGTTGAGGGCCATTATGGTATTCGGAAATACTACCAT
GGAAATCATGTACTAGGGGCCAATCTCAGTGATACTAGTCCACGATCTTTTGCCTCAAAA
CTACAGGCTAGAAGTCCAAAATATATTTCCTTGCTCAATCATATTCGAATATATTTGCCA
GAGCTCTTCCCAAACCTTGATAAAGTGGTTTTCTTGGATGATGATGTTGTAATTCAGCGC
GACTTGTCTCCATTGTGGGACATTGACCTTAAGGGAAAGGTGAATGGAGCTATTGAGACT
TGTAAAGGAGAAGATGAGTGGGTGATGTCAAAGAGATTCAGAAACTACTTTAACTTTTCT
CATCCTCTCATAGCAAAACATTTGAACCCTGAAGAGTGTGCATGGGCTTATGGGATGAAC
GTCTTTGACTTACATGCATGGAGAAAGACAAATATAAGAGACACTTACCATTCATGGCTT
AAAGAGAATCTAAAATCAAAATTGACAATGTGGAAGCTTGGAACACTACCTCCTGCTTTG
ATCGCATTCAAAGGTCACGTTCACCCCATTGACCCTTCATGGCACATGCTTGGCTTGGGC
TATCAGAATAAGTCCAACATTGAGGACGTAAAGAAGGCTGCTGTAATTCATTACAATGGC
CAGTCCAAACCTTGGCTCGAGTTAGGCTTTGAGCATCTCCGTCCTTTTTGGACCAAGTAT
GTAGACTACTCGAACGATTTTATTAAGAATTGCCACATATTGGAGTAA

Peptide Sequence

PEP ID

XP_016489959.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 14 isoform X2 [Nicotiana tabacum]
Sequence

MQLHFSPSMRSITISSSNSNGGFGELMKIKVAARHFSYRTLFHTILILAFLLPFVFILTA
VVTLEGVNKCSSFDCLGRRLGPKLLGRTDDSKRLVKDFVKILNQVNSEEVPAGLKLPESY
SQLVSEMKNNKYSAKEFALMLKGMMDRSEREIRESKFAELMNKHFAASAVPKGIHCLSLR
LTDEYSSNAHARRQLPSPELLPLLSEKLLHHFVLSTDNILAASVVVNSAVRSSLKPEKIV
FHVITDKKTYAGMHSWFALNPVSPAIVEVRGIHQFDWLTRENIPVLEAVEGHYGIRKYYH
GNHVLGANLSDTSPRSFASKLQARSPKYISLLNHIRIYLPELFPNLDKVVFLDDDVVIQR
DLSPLWDIDLKGKVNGAIETCKGEDEWVMSKRFRNYFNFSHPLIAKHLNPEECAWAYGMN
VFDLHAWRKTNIRDTYHSWLKENLKSKLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLG
YQNKSNIEDVKKAAVIHYNGQSKPWLELGFEHLRPFWTKYVDYSNDFIKNCHILE

Transcript Sequence

Gene sequence data has not been registered.